Microbiology
Lesson 14 of 65

Staphylococcus

Intermediate ⏱ 20 min read πŸ“š 45 min study πŸ—“ Updated Jul 2026 πŸ“‹ Prereq: Quality Control in Microbiology
Course Progress 0%
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Overview

Staphylococci are Gram positive cocci that occur in grape-like clusters. They are ubiquitous and are among the most common causes of localized pyogenic lesions in humans, with a well-known ability to develop resistance to penicillin and other antibiotics.

First observed by Von Recklinghausen, and named by Sir Alexander Ogston after "staphylo" (bunches of grapes) and "kokkos" (a berry), the genus includes the highly pathogenic coagulase-positive Staphylococcus aureus and the largely commensal coagulase-negative species such as S. epidermidis and S. saprophyticus.

Subject
Microbiology
Difficulty
Intermediate
Read Time
20 min
Study Time
45 min
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Learning Objectives

After this lesson you will be able to…
βœ… By the end of this lesson
  • Classify Staphylococcus into its major species.
  • Describe the morphology of Staphylococcus.
  • Discuss the cultural, biochemical, and resistance characteristics of Staphylococcus.
  • Describe the virulence factors and pathogenicity of Staphylococcus aureus.
  • Describe the laboratory diagnosis of Staphylococcus, including coagulase testing.
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Clinical Story

Why This Matters
🩺
A Patient Walks Into the Lab…

A hospitalized patient with an intravascular catheter develops sudden fever and rigors. Blood cultures grow Gram positive cocci in clusters. Is this a dangerous, invasive Staphylococcus aureus bacteremia, or a common catheter-related coagulase-negative Staphylococcus epidermidis contaminant? The coagulase test β€” performed in minutes β€” makes all the difference to how urgently the patient is treated.

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Core Concepts

Staphylococcus aureus β€” coagulase-positive, ferments mannitol, mostly pathogenic.

Staphylococcus epidermidis β€” coagulase-negative, does not ferment mannitol, mostly non-pathogenic.

Morphologically, they are spherical cocci approximately 1 ΞΌm in diameter, arranged in grape-like clusters, non-motile, non-sporing, and uniformly Gram positive. Pyogenic lesion isolates typically produce yellow (golden) colonies; normal skin isolates produce white colonies.

Staphylococci are aerobes that grow readily on ordinary media between 10–42Β°C (optimum 37Β°C, pH 7.4–7.6). On nutrient agar, colonies are large, circular, convex, smooth, opaque and easily emulsifiable; most strains produce a golden pigment optimally at 22Β°C. Selective media containing 8–10% NaCl (salt-milk agar, salt broth, lithium chloride, tellurite) help isolate S. aureus from mixed specimens like faeces.

Biochemically, staphylococci ferment many sugars producing acid but no gas, and are catalase positive. S. aureus characteristically ferments mannitol, produces clear hemolysis on blood agar, a golden yellow pigment, liquefies gelatin, and produces phosphatase.

Staphylococci are among the most resistant non-sporing bacteria, retaining viability for 3–6 months and withstanding 60Β°C for minutes (thermal death point 62Β°C for 30 minutes). Most strains tolerate 10% NaCl, some up to 15%.

Penicillin resistance develops via three mechanisms: (1) beta-lactamase (penicillinase) production splitting the beta-lactam ring, (2) altered surface receptors reducing beta-lactam binding β€” producing Methicillin Resistant Staphylococcus Aureus (MRSA), and (3) tolerance, where the organism is inhibited but not killed. Because methicillin itself is unstable, cloxacillin is used for routine sensitivity testing. Vancomycin remains useful against multi-resistant strains.

Cell surface proteins: Protein A binds the Fc portion of IgG, leaving the Fab region free β€” inducing platelet damage and hypersensitivity. The clumping factor (bound coagulase) causes visible clumping in the slide coagulase test.

Extracellular enzymes: lipases aid skin/subcutaneous invasion, hyaluronidase breaks down connective tissue, staphylokinase spreads infection, and a heat-stable nuclease is a characteristic marker of S. aureus.

Toxins: cytolytic hemolysins (alpha, beta, gamma, delta) and leucocidin; heat-stable enterotoxin causing food poisoning; Toxic Shock Syndrome Toxin (TSST) causing a potentially fatal multisystem disease; and exfoliative toxin causing Staphylococcal Scalded Skin Syndrome (SSSS) β€” severe forms are Ritter's disease (newborns) and toxic epidermal necrolysis (adults); milder forms are pemphigus neonatorum and bullous impetigo.

Common infections include skin/soft tissue (folliculitis, boils, abscess, wound infection, carbuncle, impetigo, paronychia), musculoskeletal (osteomyelitis, arthritis), respiratory (tonsillitis, pneumonia), CNS (abscess, meningitis), endovascular (bacteremia, endocarditis), and urinary tract infections (usually instrumentation/implant related). Staphylococcal lesions are characteristically localized, unlike the spreading nature of streptococcal infection.

Staph epidermidis is normal skin flora that can cause stitch abscesses and device-related bacteremia (artificial heart valves, catheters, prosthetics). Staph saprophyticus is normal periurethral flora that causes UTIs in sexually active young women; it is distinguished by novobiocin resistance.

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Laboratory Principle

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The Science Behind Staphylococcal Identification

The coagulase test is the pivotal identification step: bound coagulase (clumping factor) on the bacterial surface binds fibrinogen directly, producing visible clumping in the slide test; free coagulase secreted into broth activates prothrombin, converting fibrinogen to fibrin and clotting plasma in the tube test. Because S. aureus almost uniquely produces both forms, coagulase positivity is the definitive marker separating it from the far more numerous coagulase-negative staphylococci that are usually non-pathogenic.

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Equipment Required

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Blood agar plates
Primary isolation medium
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Salt-milk / Ludlam's agar
Selective media for staphylococci
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Water bath (37Β°C)
Tube coagulase incubation
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Robertson's cooked meat medium
Selective inoculation for scanty specimens
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Reagents & Materials

Reagent / Material Concentration / Grade Purpose Storage
Rabbit / human plasmaEDTA, oxalate, or heparin anticoagulatedSlide and tube coagulase testsRefrigerated (2–8Β°C)
Saline0.85% NaClEmulsifying isolate for slide coagulaseRoom temperature
Mannitol salt agar7.5% NaCl selective mediumSelective isolation and mannitol fermentationRefrigerated plates, 2–8Β°C
Novobiocin disc5 ΞΌgDifferentiating S. saprophyticus (resistant) from S. epidermidis (sensitive)Refrigerated, protect from moisture
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Step-by-Step Procedure

1
Specimen Collection & Direct Microscopy

Collect specimen appropriate to the lesion (pus, sputum, nasal swab for carriers, food/faeces for food poisoning). Perform Gram staining directly on pus specimens β€” cocci in clusters may be readily seen.

2
Culture

Plate on blood agar; colonies appear after overnight incubation. For specimens where staphylococci are expected to be scanty, use selective media such as Ludlam's agar, salt-milk agar, or Robertson's cooked meat medium (10% NaCl).

3
Slide Coagulase Test

Emulsify the isolate in a drop of saline on a slide, check for absence of autoagglutination, add a drop of plasma, and mix. Prompt clumping = positive for bound coagulase. Always set up positive and negative controls.

4
Tube Coagulase Test

Add ~0.1 mL of a young broth or agar culture suspension to ~0.5 mL of plasma in a narrow test tube. Incubate at 37Β°C for 3–6 hours (up to 24 h if needed). A clot that does not flow on tilting = positive; this is the deciding test when slide and tube results diverge.

5
Confirm with Catalase and Susceptibility Testing

Confirm catalase positivity (differentiates from Streptococcus), then perform antibiotic sensitivity testing (including cloxacillin for MRSA screening) as a guide to treatment.

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Flow Diagram

Specimen (pus, blood, swab)
Gram Stain + Culture on Blood Agar
Catalase Test (confirm Staphylococcus)
Slide Coagulase β†’ Tube Coagulase (if negative)
βœ“ S. aureus Confirmed β†’ Susceptibility Testing
βœ…

Quality Control

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Internal Quality Control

Run Staphylococcus aureus ATCC 25923 as a coagulase-positive control and Staphylococcus epidermidis as a coagulase-negative control with every batch of plasma tested. Discard any plasma lot that fails to clot with the positive control.

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External Quality Assessment

Participate in external proficiency testing programs that periodically send blinded Staphylococcus isolates (including MRSA strains) to confirm accurate species identification and susceptibility reporting.

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Reference Values

Species Characteristics
S. aureus β€” Coagulase
Positive
+
S. epidermidis β€” Coagulase
Negative
βˆ’
S. saprophyticus β€” Novobiocin
Resistant
R
S. aureus β€” Mannitol fermentation
Positive
Acid produced
Thermal death point
62
Β°C for 30 min
Optimum growth temperature
37
Β°C (range 10–42Β°C)

⚠️ Reference reactions may vary between strains. Always confirm identification with positive/negative controls run in parallel.

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Clinical Interpretation

FindingPossible SignificanceAction / Follow-up
Coagulase-positive GPC in clusters from pusStaphylococcus aureus β€” likely true pathogenProceed to cloxacillin/MRSA susceptibility testing
Coagulase-negative GPC from a single blood cultureOften skin contaminant (S. epidermidis) unless from a device or repeated culturesCorrelate with clinical picture; repeat culture if uncertain
Cloxacillin/methicillin resistant S. aureusMRSA β€” resistant to all beta-lactamsInitiate contact precautions; treat with vancomycin or alternative MRSA-active agent
Coagulase-negative, novobiocin-resistant isolate from urineStaphylococcus saprophyticus β€” common UTI in young sexually active womenTreat as urinary pathogen, not contaminant
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Common Errors & How to Avoid Them

⚠️ Error: Misinterpreting autoagglutination as a positive slide coagulase

Cause: Some strains clump spontaneously in saline even before plasma is added, mimicking a true positive.
Prevention: Always check for autoagglutination in saline alone before adding plasma; if present, proceed directly to the tube test.

⚠️ Error: Using unstable methicillin for routine susceptibility testing

Cause: Methicillin itself degrades quickly and can give unreliable results.
Prevention: Use cloxacillin (a stable penicillinase-resistant penicillin) as the standard surrogate marker for MRSA screening.

⚠️ Error: Dismissing coagulase-negative staphylococci as always contaminants

Cause: Assuming any coagulase-negative isolate is a skin contaminant can miss true infections associated with prosthetic devices, catheters, and heart valves.
Prevention: Correlate with clinical context β€” repeated positive cultures, indwelling devices, or immunocompromise raise suspicion for true infection.

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Laboratory Tips from the Bench

πŸ’‘ Pro Tip

When the slide and tube coagulase results disagree, always trust the tube test β€” it is the definitive method for detecting free coagulase.

πŸ’‘ Pro Tip

A novobiocin disc quickly separates the coagulase-negative species: S. saprophyticus is resistant, while S. epidermidis is sensitive β€” a useful shortcut in urine isolates.

🧠 Memory Tip

"Grapes that clot the plasma" β€” Staphylococcus (grape clusters) that is coagulase positive = S. aureus, the true pathogen of the group.

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Important Notes

⚠️
MRSA is a Major Nosocomial Threat

Methicillin Resistant Staphylococcus Aureus (MRSA) causes serious nosocomial infections and requires prompt identification, isolation precautions, and treatment with vancomycin or other reserved agents.

ℹ️
Phage Typing for Outbreak Investigation

Bacteriophage typing of Staphylococcus is of great importance in epidemiological studies, helping trace the source of hospital or community outbreaks by identifying the specific phage type responsible.

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Interactive Quiz

Test Your Knowledge
Lesson Quiz
5 Questions ⏱ ~5 min
Multiple Choice β€” Question 1 of 5
Which test is used to routinely test for MRSA because methicillin itself is unstable?
True or False β€” Question 2 of 5
Staphylococcus saprophyticus is resistant to novobiocin while Staphylococcus epidermidis is sensitive.
Fill in the Blank β€” Question 3 of 5
Complete the sentence: "The toxin responsible for staphylococcal scalded skin syndrome is the ___ toxin."
Match the Following β€” Question 4 of 5
Match each Staphylococcus species with its key characteristic.
Column A
S. aureus
S. epidermidis
S. saprophyticus
MRSA
Column B
Novobiocin resistant, causes UTI
Coagulase positive, mannitol fermenter
mecA gene positive
Catheter-related bacteremia
Case-Based Question β€” Question 5 of 5
Case: A neonate develops widespread skin blistering and peeling with a positive Nikolsky sign. Skin swabs from the nose grow Staphylococcus aureus.
Which toxin-mediated condition is most likely?
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Flashcards

Tap to flip

Click or tap any card to reveal the answer. Use arrow keys to navigate in single-card mode.

Term
Protein A
πŸ‘† Tap to reveal
Answer
Surface protein of S. aureus that binds the Fc portion of IgG, causing platelet damage and hypersensitivity
πŸ‘† Tap to flip back
Term
Clumping factor
πŸ‘† Tap to reveal
Answer
Bound coagulase responsible for the positive slide coagulase test
πŸ‘† Tap to flip back
Term
MRSA
πŸ‘† Tap to reveal
Answer
Methicillin Resistant Staphylococcus Aureus, resistant to all beta-lactams via altered surface receptors
πŸ‘† Tap to flip back
Term
TSST
πŸ‘† Tap to reveal
Answer
Toxic Shock Syndrome Toxin β€” causes fever, hypotension, rash, and multisystem involvement
πŸ‘† Tap to flip back
Term
Enterotoxin
πŸ‘† Tap to reveal
Answer
Heat-stable toxin causing staphylococcal food poisoning (nausea, vomiting, diarrhea)
πŸ‘† Tap to flip back
Term
Ritter's disease
πŸ‘† Tap to reveal
Answer
Severe neonatal form of Staphylococcal Scalded Skin Syndrome caused by exfoliative toxin
πŸ‘† Tap to flip back
πŸ“‹

Clinical Case Study

Apply Your Knowledge
πŸ‘€
Michael D'Souza (fictional)
55 year old Male Β· Post-cardiac surgery, prosthetic valve

Three weeks after prosthetic valve replacement, presents with low-grade fever, malaise, and a new murmur. Three sets of blood cultures are drawn.

Blood culture x3
All positive, GPC clusters
Catalase
Positive
Coagulase (slide & tube)
Negative
Novobiocin
Sensitive

Coagulase-negative, novobiocin-sensitive staphylococcus growing repeatedly (3/3 sets) in a patient with a prosthetic valve strongly suggests true Staphylococcus epidermidis prosthetic valve endocarditis rather than a skin contaminant.

Prosthetic Valve Endocarditis (S. epidermidis)
  • β†’Coagulase-negative staphylococci are not always contaminants, especially with prosthetic devices.
  • β†’Multiple positive blood culture sets increase confidence that an isolate is a true pathogen.
  • β†’Novobiocin susceptibility helps distinguish S. epidermidis from S. saprophyticus.
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Frequently Asked Questions

Sir Alexander Ogston named the genus from the Greek "staphylo" (bunches of grapes) and "kokkos" (berry) because the cocci divide in multiple, irregular planes, producing grape-like clusters when viewed under the microscope in culture.

Methicillin is chemically unstable and degrades under standard testing conditions, giving unreliable results. Cloxacillin, a stable penicillinase-resistant penicillin, is used instead as a reliable surrogate marker for MRSA.

Staphylococcal food poisoning is an intoxication, not an infection β€” it results from ingesting pre-formed, heat-stable enterotoxin in contaminated food (meat, fish, milk products), not from bacterial multiplication in the gut. Symptoms are rapid in onset and usually self-limiting.

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Quick Revision

10-Minute Review
Point 01
Staphylococci are Gram positive cocci arranged in grape-like clusters.
Point 02
S. aureus is coagulase positive; S. epidermidis and S. saprophyticus are coagulase negative.
Point 03
S. aureus ferments mannitol and produces a golden yellow pigment.
Point 04
MRSA arises from altered surface receptors reducing beta-lactam binding.
Point 05
Cloxacillin is used for routine MRSA susceptibility testing.
Point 06
Novobiocin resistance identifies S. saprophyticus, a cause of UTI in young women.
Point 07
Exfoliative toxin causes staphylococcal scalded skin syndrome (Ritter's disease in infants).
Point 08
Tube coagulase test is the deciding test when slide and tube results diverge.
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Key Takeaways

πŸŽ“ What You Have Learnt
  • Staphylococci are spherical, non-motile, Gram positive cocci in grape-like clusters.
  • Coagulase positivity is the defining feature separating S. aureus from other staphylococci.
  • S. aureus produces a wide range of toxins and enzymes that drive its virulence.
  • MRSA arises via altered PBP2a receptors and is a major cause of nosocomial infection.
  • Coagulase-negative staphylococci can be true pathogens in device-related infections.
  • Laboratory diagnosis relies on Gram stain, culture, catalase, and coagulase testing.
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Competency Checklist

Track Your Mastery
β˜‘οΈ Staphylococcus β€” Competency
0/8 complete
I understand the principle of this topic
I know the equipment required
I know the reagents and their concentrations
I can perform the procedure step-by-step
I know the normal reference values
I can identify and avoid common errors
I can interpret abnormal results clinically
I passed the quiz with a satisfactory score
Competency progress
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References

  1. Collee JG, Fraser AG, Marmion BP, Simmons A. Mackie & McCartney Practical Medical Microbiology. 14th ed. Churchill Livingstone.
  2. Ananthanarayan R, Paniker CKJ. Textbook of Microbiology. 10th ed. Universities Press.
  3. National Institute of Open Schooling (NIOS). Microbiology β€” Staphylococcus, Module Notes.